Although atmospheric satellite research has a long history, in the past few years it gained a new momentum due to the development of the solar panel technology and material design. The so-called high-altitude platforms (HAPs) have a great advantage over satellites at imaging resolution and telecommunication in a lower cost. In this paper we present a hardware configuration for modelling aeroelastic vibrations of the wing of an atmospheric Unmanned Aerial System (UAS) with imaging and inertial sensors. The cameras have multiple purposes in our setup, we intend to use them for super-resolution imaging and to reduce the inertial measurement drift by image registration through time intervals.